J3_6NUO_045

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAG*CGG*UCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6NUO_045 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.0821

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

6NUO|1|YA|C|1344
6NUO|1|YA|G|1345
6NUO|1|YA|U|1346
6NUO|1|YA|A|1347
6NUO|1|YA|A|1348
6NUO|1|YA|G|1349
*
6NUO|1|YA|C|1671
6NUO|1|YA|G|1672
6NUO|1|YA|G|1673
*
6NUO|1|YA|U|1686
6NUO|1|YA|C|1687
6NUO|1|YA|A|1688
6NUO|1|YA|G|1689

Current chains

Chain YA

23S rRNA

Nearby chains