J3_6O90_007

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CUAAG*CGUAAAC*GUAG

Length

16 nucleotides

Bulged bases

6O90|1|A|U|1650, 6O90|1|A|A|1652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6O90_007 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1342

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

6O90|1|A|C|1341
6O90|1|A|U|1342
6O90|1|A|A|1343
6O90|1|A|A|1344
6O90|1|A|G|1345
*
6O90|1|A|C|1648
6O90|1|A|G|1649
6O90|1|A|U|1650
6O90|1|A|A|1651
6O90|1|A|A|1652
6O90|1|A|A|1653
6O90|1|A|C|1654
*
6O90|1|A|G|1663
6O90|1|A|U|1664
6O90|1|A|A|1665
6O90|1|A|G|1666

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L34