J3_6O90_020
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O90_020 not in the Motif Atlas
- Homologous match to J3_5J7L_008
- Geometric discrepancy: 0.1315
- The information below is about J3_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6O90|1|a|C|1079
6O90|1|a|G|1080
6O90|1|a|U|1081
6O90|1|a|C|1082
6O90|1|a|A|1083
6O90|1|a|G|1084
*
6O90|1|a|C|1123
6O90|1|a|G|1124
6O90|1|a|C|1125
6O90|1|a|A|1126
6O90|1|a|A|1127
6O90|1|a|C|1128
6O90|1|a|C|1129
*
6O90|1|a|G|1202
6O90|1|a|A|1203
6O90|1|a|U|1204
6O90|1|a|G|1205
6O90|1|a|A|1206
6O90|1|a|C|1207
6O90|1|a|G|1208
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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