J3_6OLE_026

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6OLE|1|t|G|2741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|A|2530
6OLE|1|t|G|2531
6OLE|1|t|A|2532
6OLE|1|t|U|2533
6OLE|1|t|G|2534
*
6OLE|1|t|C|2551
6OLE|1|t|A|2552
6OLE|1|t|G|2553
6OLE|1|t|U|2554
*
6OLE|1|t|A|2736
6OLE|1|t|G|2737
6OLE|1|t|G|2738
6OLE|1|t|G|2739
6OLE|1|t|U|2740
6OLE|1|t|G|2741
6OLE|1|t|U|2742
6OLE|1|t|A|2743
6OLE|1|t|A|2744
6OLE|1|t|A|2745
6OLE|1|t|U|2746

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain a

60S ribosomal protein L27