J3_6OLZ_016
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUC*GCCUCACGAUCC*GGUGUC
- Length
- 21 nucleotides
- Bulged bases
- 6OLZ|1|A2|U|4336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLZ_016 not in the Motif Atlas
- Geometric match to J3_4V9F_018
- Geometric discrepancy: 0.1704
- The information below is about J3_4V9F_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44792.1
- Basepair signature
- cWW-F-tHH-cWW-tHW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
6OLZ|1|A2|G|4190
6OLZ|1|A2|U|4191
6OLZ|1|A2|C|4192
*
6OLZ|1|A2|G|4293
6OLZ|1|A2|C|4294
6OLZ|1|A2|C|4295
6OLZ|1|A2|U|4296
6OLZ|1|A2|C|4297
6OLZ|1|A2|A|4298
6OLZ|1|A2|C|4299
6OLZ|1|A2|G|4300
6OLZ|1|A2|A|4301
6OLZ|1|A2|U|4302
6OLZ|1|A2|C|4303
6OLZ|1|A2|C|4304
*
6OLZ|1|A2|G|4332
6OLZ|1|A2|G|4333
6OLZ|1|A2|U|4334
6OLZ|1|A2|G|4335
6OLZ|1|A2|U|4336
6OLZ|1|A2|C|4337
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AQ
- 60S ribosomal protein L18
- Chain AT
- 60S ribosomal protein L21
- Chain Aa
- 60S ribosomal protein L27a
- Chain Ao
- 60S ribosomal protein L36a
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