J3_6OLZ_025
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 6OLZ|1|B1|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLZ_025 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.1542
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|B1|A|938
6OLZ|1|B1|U|939
6OLZ|1|B1|U|940
6OLZ|1|B1|C|941
*
6OLZ|1|B1|G|985
6OLZ|1|B1|G|986
6OLZ|1|B1|A|987
6OLZ|1|B1|C|988
6OLZ|1|B1|C|989
6OLZ|1|B1|A|990
6OLZ|1|B1|G|991
6OLZ|1|B1|A|992
6OLZ|1|B1|G|993
*
6OLZ|1|B1|C|1000
6OLZ|1|B1|A|1001
6OLZ|1|B1|U|1002
6OLZ|1|B1|U|1003
6OLZ|1|B1|U|1004
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain Ap
- 60S ribosomal protein L37a
- Chain BB
- 40S ribosomal protein S3a
- Chain BN
- 40S ribosomal protein S13
- Chain BO
- 40S ribosomal protein S14
- Chain Ba
- 40S ribosomal protein S26
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