J3_6OM0_030
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUC*GUU*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 6OM0|1|t|A|4426, 6OM0|1|t|U|4427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OM0_030 not in the Motif Atlas
- Homologous match to J3_5TBW_014
- Geometric discrepancy: 0.0955
- The information below is about J3_5TBW_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_98597.1
- Basepair signature
- cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OM0|1|t|U|4425
6OM0|1|t|A|4426
6OM0|1|t|U|4427
6OM0|1|t|C|4428
*
6OM0|1|t|G|4453
6OM0|1|t|U|4454
6OM0|1|t|U|4455
*
6OM0|1|t|A|4469
6OM0|1|t|C|4470
6OM0|1|t|U|4471
6OM0|1|t|A|4472
6OM0|1|t|A|4473
6OM0|1|t|U|4474
6OM0|1|t|A|4475
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain P
- 60S ribosomal protein L13a
- Chain W
- 60S ribosomal protein L23
Coloring options: