J3_6OM7_049
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUC*GCCUCACGAUCC*GGUGUC
- Length
- 21 nucleotides
- Bulged bases
- 6OM7|1|t|U|4336
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OM7_049 not in the Motif Atlas
- Homologous match to J3_8C3A_056
- Geometric discrepancy: 0.1132
- The information below is about J3_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_27903.1
- Basepair signature
- cWW-F-F-F-cWW-F-F-F-F-tHW-tHW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
6OM7|1|t|G|4190
6OM7|1|t|U|4191
6OM7|1|t|C|4192
*
6OM7|1|t|G|4293
6OM7|1|t|C|4294
6OM7|1|t|C|4295
6OM7|1|t|U|4296
6OM7|1|t|C|4297
6OM7|1|t|A|4298
6OM7|1|t|C|4299
6OM7|1|t|G|4300
6OM7|1|t|A|4301
6OM7|1|t|U|4302
6OM7|1|t|C|4303
6OM7|1|t|C|4304
*
6OM7|1|t|G|4332
6OM7|1|t|G|4333
6OM7|1|t|U|4334
6OM7|1|t|G|4335
6OM7|1|t|U|4336
6OM7|1|t|C|4337
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L21
- Chain b
- 60S ribosomal protein L27a
- Chain p
- 60S ribosomal protein L36a
- Chain v
- Transfer RNA; tRNA
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