J3_6ORE_017

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

6ORE|1|2|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ORE_017 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.0673

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

6ORE|1|2|C|826
6ORE|1|2|U|827
6ORE|1|2|U|828
6ORE|1|2|G|829
*
6ORE|1|2|C|857
6ORE|1|2|G|858
6ORE|1|2|G|859
6ORE|1|2|A|860
6ORE|1|2|G|861
*
6ORE|1|2|C|868
6ORE|1|2|G|869
6ORE|1|2|U|870
6ORE|1|2|U|871
6ORE|1|2|A|872
6ORE|1|2|A|873
6ORE|1|2|G|874

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain m

30S ribosomal protein S8

Chain z

30S ribosomal protein S21