J3_6OSK_005

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

6OSK|1|1|A|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSK_005 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.1043

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

6OSK|1|1|C|1298
6OSK|1|1|G|1299
6OSK|1|1|G|1300
6OSK|1|1|A|1301
6OSK|1|1|A|1302
6OSK|1|1|G|1303
*
6OSK|1|1|C|1625
6OSK|1|1|A|1626
6OSK|1|1|G|1627
*
6OSK|1|1|C|1639
6OSK|1|1|A|1640
6OSK|1|1|A|1641
6OSK|1|1|G|1642

Current chains

Chain 1

23S ribosomal RNA

Nearby chains