J3_6OSQ_017

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

6OSQ|1|2|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSQ_017 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.0876

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

6OSQ|1|2|C|826
6OSQ|1|2|U|827
6OSQ|1|2|U|828
6OSQ|1|2|G|829
*
6OSQ|1|2|C|857
6OSQ|1|2|G|858
6OSQ|1|2|G|859
6OSQ|1|2|A|860
6OSQ|1|2|G|861
*
6OSQ|1|2|C|868
6OSQ|1|2|G|869
6OSQ|1|2|U|870
6OSQ|1|2|U|871
6OSQ|1|2|A|872
6OSQ|1|2|A|873
6OSQ|1|2|G|874

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain m

30S ribosomal protein S8

Chain z

30S ribosomal protein S21