J3_6QNR_033
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUACC*GGGCGA
- Length
- 27 nucleotides
- Bulged bases
- 6QNR|1|1G|A|975, 6QNR|1|1G|G|976, 6QNR|1|1G|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6QNR_033 not in the Motif Atlas
- Homologous match to J3_6CZR_062
- Geometric discrepancy: 0.1572
- The information below is about J3_6CZR_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_59791.1
- Basepair signature
- cWW-F-F-F-F-F-tSS-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
6QNR|1|1G|U|955
6QNR|1|1G|U|956
6QNR|1|1G|U|957
6QNR|1|1G|A|958
6QNR|1|1G|A|959
6QNR|1|1G|U|960
6QNR|1|1G|U|961
6QNR|1|1G|C|962
*
6QNR|1|1G|G|973
6QNR|1|1G|A|974
6QNR|1|1G|A|975
6QNR|1|1G|G|976
6QNR|1|1G|A|977
6QNR|1|1G|A|978
6QNR|1|1G|C|979
6QNR|1|1G|C|980
6QNR|1|1G|U|981
6QNR|1|1G|U|982
6QNR|1|1G|A|983
6QNR|1|1G|C|984
6QNR|1|1G|C|985
*
6QNR|1|1G|G|1220
6QNR|1|1G|G|1221
6QNR|1|1G|G|1222
6QNR|1|1G|C|1223
6QNR|1|1G|G|1224
6QNR|1|1G|A|1225
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1A
- 30S ribosomal protein S10
- Chain 1L
- Transfer RNA; tRNA
- Chain 4A
- 30S ribosomal protein S13
- Chain 5A
- 30S ribosomal protein S14 type Z
- Chain AA
- 30S ribosomal protein S19
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