J3_6QNR_047

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGGGAC*GGCAG*CC

Length

14 nucleotides

Bulged bases

6QNR|1|1H|A|1431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6QNR_047 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.1042

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

6QNR|1|1H|G|1391
6QNR|1|1H|C|1392
6QNR|1|1H|G|1393
6QNR|1|1H|G|1394
6QNR|1|1H|G|1395
6QNR|1|1H|A|1396
6QNR|1|1H|C|1397
*
6QNR|1|1H|G|1428
6QNR|1|1H|G|1429
6QNR|1|1H|C|1430
6QNR|1|1H|A|1431
6QNR|1|1H|G|1432
*
6QNR|1|1H|C|1449
6QNR|1|1H|C|1450

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain F8

50S ribosomal protein L23