J3_6RM3_002
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 6RM3|1|L50|A|543, 6RM3|1|L50|G|650
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6RM3_002 not in the Motif Atlas
- Homologous match to J3_5TBW_004
- Geometric discrepancy: 0.1642
- The information below is about J3_5TBW_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6RM3|1|L50|U|540
6RM3|1|L50|G|541
6RM3|1|L50|A|542
6RM3|1|L50|A|543
6RM3|1|L50|C|544
6RM3|1|L50|U|545
6RM3|1|L50|A|546
*
6RM3|1|L50|U|631
6RM3|1|L50|A|632
6RM3|1|L50|G|633
*
6RM3|1|L50|C|649
6RM3|1|L50|G|650
6RM3|1|L50|A|651
6RM3|1|L50|A|652
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LA0
- uL2
- Chain LG0
- eL8
- Chain LJJ
- eL37
- Chain LLL
- eL39
- Chain LN0
- eL15
Coloring options: