J3_6T59_001

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6T59|1|54|C|159

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|C|112
6T59|1|54|A|113
6T59|1|54|G|114
6T59|1|54|C|115
6T59|1|54|G|116
*
6T59|1|54|C|155
6T59|1|54|G|156
6T59|1|54|U|157
6T59|1|54|A|158
6T59|1|54|C|159
6T59|1|54|G|160
*
6T59|1|54|C|275
6T59|1|54|C|276
6T59|1|54|G|277
6T59|1|54|G|278

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain G3

eL8

Chain L3

eL13

Chain N3

Ribosomal protein L15

Chain h3

uL29

Chain i3

60S ribosomal protein L36