J3_6T59_006
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UU*AGAAG*CGUGGA
- Length
- 13 nucleotides
- Bulged bases
- 6T59|1|54|A|1805, 6T59|1|54|U|1834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T59_006 not in the Motif Atlas
- Homologous match to J3_8P9A_051
- Geometric discrepancy: 0.4262
- The information below is about J3_8P9A_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_09667.1
- Basepair signature
- cWW-cWW-F-F-cSS-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6T59|1|54|U|1726
6T59|1|54|U|1727
*
6T59|1|54|A|1802
6T59|1|54|G|1803
6T59|1|54|A|1804
6T59|1|54|A|1805
6T59|1|54|G|1806
*
6T59|1|54|C|1832
6T59|1|54|G|1833
6T59|1|54|U|1834
6T59|1|54|G|1835
6T59|1|54|G|1836
6T59|1|54|A|1837
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain F3
- Ul30
- Chain T3
- eL21
- Chain b3
- eL29
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