J3_6T59_010

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6T59|1|54|U|2763

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|A|2551
6T59|1|54|G|2552
6T59|1|54|A|2553
6T59|1|54|U|2554
6T59|1|54|G|2555
*
6T59|1|54|C|2572
6T59|1|54|A|2573
6T59|1|54|G|2574
6T59|1|54|U|2575
*
6T59|1|54|A|2757
6T59|1|54|G|2758
6T59|1|54|G|2759
6T59|1|54|G|2760
6T59|1|54|U|2761
6T59|1|54|G|2762
6T59|1|54|U|2763
6T59|1|54|A|2764
6T59|1|54|A|2765
6T59|1|54|A|2766
6T59|1|54|U|2767

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain Z3

60S ribosomal protein L27