J3_6TNN_013
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CC*GUUGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6TNN|1|U|U|2856, 6TNN|1|U|A|2858
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6TNN_013 not in the Motif Atlas
- Homologous match to J3_7A0S_013
- Geometric discrepancy: 0.1823
- The information below is about J3_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6TNN|1|U|C|2837
6TNN|1|U|C|2838
*
6TNN|1|U|G|2854
6TNN|1|U|U|2855
6TNN|1|U|U|2856
6TNN|1|U|G|2857
6TNN|1|U|A|2858
6TNN|1|U|U|2859
*
6TNN|1|U|A|2905
6TNN|1|U|A|2906
6TNN|1|U|U|2907
6TNN|1|U|C|2908
6TNN|1|U|G|2909
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain X
- 50S ribosomal protein L3
- Chain g
- 50S ribosomal protein L17
- Chain p
- 50S ribosomal protein L32
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