J3_6UCQ_072

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6UCQ|1|2a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6UCQ_072 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.2199

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6UCQ|1|2a|C|990
6UCQ|1|2a|U|991
6UCQ|1|2a|U|992
6UCQ|1|2a|G|993
6UCQ|1|2a|A|994
6UCQ|1|2a|C|995
6UCQ|1|2a|A|996
6UCQ|1|2a|U|997
*
6UCQ|1|2a|A|1044
6UCQ|1|2a|C|1045
6UCQ|1|2a|A|1046
6UCQ|1|2a|G|1047
*
6UCQ|1|2a|C|1210
6UCQ|1|2a|U|1211
6UCQ|1|2a|U|1212
6UCQ|1|2a|A|1213
6UCQ|1|2a|C|1214
6UCQ|1|2a|G|1215

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2c

30S ribosomal protein S3

Chain 2n

30S ribosomal protein S14 type Z