J3_6UZ7_014
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 6UZ7|1|5|A|788, 6UZ7|1|5|G|895
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_014 not in the Motif Atlas
- Homologous match to J3_5TBW_004
- Geometric discrepancy: 0.1241
- The information below is about J3_5TBW_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|5|U|785
6UZ7|1|5|G|786
6UZ7|1|5|A|787
6UZ7|1|5|A|788
6UZ7|1|5|C|789
6UZ7|1|5|U|790
6UZ7|1|5|A|791
*
6UZ7|1|5|U|876
6UZ7|1|5|A|877
6UZ7|1|5|G|878
*
6UZ7|1|5|C|894
6UZ7|1|5|G|895
6UZ7|1|5|A|896
6UZ7|1|5|A|897
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain AN
- Ribosomal protein L15
- Chain Bj
- Ribosomal protein L37
- Chain Bl
- 60S ribosomal protein L39
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