J3_6UZ7_017
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAAGUG*CAA*UCUA
- Length
- 14 nucleotides
- Bulged bases
- 6UZ7|1|5|A|1453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_017 not in the Motif Atlas
- Homologous match to J3_5TBW_008
- Geometric discrepancy: 0.109
- The information below is about J3_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_10154.2
- Basepair signature
- cWW-tWW-tHW-cWW-tSH-cWW-cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
6UZ7|1|5|U|1450
6UZ7|1|5|G|1451
6UZ7|1|5|A|1452
6UZ7|1|5|A|1453
6UZ7|1|5|G|1454
6UZ7|1|5|U|1455
6UZ7|1|5|G|1456
*
6UZ7|1|5|C|1826
6UZ7|1|5|A|1827
6UZ7|1|5|A|1828
*
6UZ7|1|5|U|1840
6UZ7|1|5|C|1841
6UZ7|1|5|U|1842
6UZ7|1|5|A|1843
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AR
- KLLA0E12453p
- Chain Bg
- KLLA0C08371p
Coloring options: