J3_6UZ7_018
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAA*UGAUAAC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 6UZ7|1|5|U|1809, 6UZ7|1|5|A|1810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_018 not in the Motif Atlas
- Homologous match to J3_5TBW_009
- Geometric discrepancy: 0.0828
- The information below is about J3_5TBW_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_74051.1
- Basepair signature
- cWW-tSH-tWW-tHW-F-F-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6UZ7|1|5|G|1459
6UZ7|1|5|A|1460
6UZ7|1|5|A|1461
6UZ7|1|5|A|1462
*
6UZ7|1|5|U|1806
6UZ7|1|5|G|1807
6UZ7|1|5|A|1808
6UZ7|1|5|U|1809
6UZ7|1|5|A|1810
6UZ7|1|5|A|1811
6UZ7|1|5|C|1812
*
6UZ7|1|5|G|1821
6UZ7|1|5|U|1822
6UZ7|1|5|C|1823
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Bg
- KLLA0C08371p
- Chain Bj
- Ribosomal protein L37
- Chain Bl
- 60S ribosomal protein L39
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