J3_6V3A_006
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CGAAAG*CAG*CAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6V3A_006 not in the Motif Atlas
- Homologous match to J3_5J7L_041
- Geometric discrepancy: 0.1643
- The information below is about J3_5J7L_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32852.6
- Basepair signature
- cWW-tSH-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
6V3A|1|AN1|C|1293
6V3A|1|AN1|G|1294
6V3A|1|AN1|A|1295
6V3A|1|AN1|A|1296
6V3A|1|AN1|A|1297
6V3A|1|AN1|G|1298
*
6V3A|1|AN1|C|1623
6V3A|1|AN1|A|1624
6V3A|1|AN1|G|1625
*
6V3A|1|AN1|C|1637
6V3A|1|AN1|A|1638
6V3A|1|AN1|A|1639
6V3A|1|AN1|G|1640
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: