J3_6V3E_004
3D structure
- PDB id
- 6V3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- CUAG*CGCAG*CGAUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6V3E|1|sN1|U|868
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6V3E_004 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1341
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6V3E|1|sN1|C|823
6V3E|1|sN1|U|824
6V3E|1|sN1|A|825
6V3E|1|sN1|G|826
*
6V3E|1|sN1|C|854
6V3E|1|sN1|G|855
6V3E|1|sN1|C|856
6V3E|1|sN1|A|857
6V3E|1|sN1|G|858
*
6V3E|1|sN1|C|865
6V3E|1|sN1|G|866
6V3E|1|sN1|A|867
6V3E|1|sN1|U|868
6V3E|1|sN1|A|869
6V3E|1|sN1|A|870
6V3E|1|sN1|G|871
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S8
Coloring options: