J3_6W6P_011
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 6W6P|1|A|A|2532, 6W6P|1|A|U|2533
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_011 not in the Motif Atlas
- Homologous match to J3_4WF9_009
- Geometric discrepancy: 0.1081
- The information below is about J3_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6W6P|1|A|C|2531
6W6P|1|A|A|2532
6W6P|1|A|U|2533
6W6P|1|A|C|2534
*
6W6P|1|A|G|2559
6W6P|1|A|U|2560
6W6P|1|A|U|2561
*
6W6P|1|A|A|2575
6W6P|1|A|U|2576
6W6P|1|A|U|2577
6W6P|1|A|A|2578
6W6P|1|A|A|2579
6W6P|1|A|A|2580
6W6P|1|A|G|2581
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L14
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