J3_6W6P_030
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_030 not in the Motif Atlas
- Homologous match to J3_7A0S_019
- Geometric discrepancy: 0.1048
- The information below is about J3_7A0S_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.3
- Basepair signature
- cWW-tSH-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
6W6P|1|A|G|1466
6W6P|1|A|G|1467
6W6P|1|A|G|1468
6W6P|1|A|A|1469
6W6P|1|A|C|1470
6W6P|1|A|G|1471
*
6W6P|1|A|C|1610
6W6P|1|A|C|1611
*
6W6P|1|A|G|1614
6W6P|1|A|A|1615
6W6P|1|A|A|1616
6W6P|1|A|A|1617
6W6P|1|A|A|1618
6W6P|1|A|G|1619
6W6P|1|A|C|1620
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: