J3_6W6P_032
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCCUAAU*AGGGAAUCU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 6W6P|1|a|C|45, 6W6P|1|a|A|47, 6W6P|1|a|A|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_032 not in the Motif Atlas
- Homologous match to J3_4LFB_014
- Geometric discrepancy: 0.1092
- The information below is about J3_4LFB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_63856.2
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-tHH-F-cWW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6W6P|1|a|G|43
6W6P|1|a|C|44
6W6P|1|a|C|45
6W6P|1|a|U|46
6W6P|1|a|A|47
6W6P|1|a|A|48
6W6P|1|a|U|49
*
6W6P|1|a|A|374
6W6P|1|a|G|375
6W6P|1|a|G|376
6W6P|1|a|G|377
6W6P|1|a|A|378
6W6P|1|a|A|379
6W6P|1|a|U|380
6W6P|1|a|C|381
6W6P|1|a|U|382
*
6W6P|1|a|A|408
6W6P|1|a|G|409
6W6P|1|a|C|410
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
Coloring options: