3D structure

PDB id
6WRS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAUC*GUUG*CAUUAAAG
Length
16 nucleotides
Bulged bases
6WRS|1|1|A|2545, 6WRS|1|1|U|2546
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6WRS_020 not in the Motif Atlas
Geometric match to J3_4V9F_009
Geometric discrepancy: 0.2488
The information below is about J3_4V9F_009
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_69441.1
Basepair signature
cWW-cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
Number of instances in this motif group
1

Unit IDs

6WRS|1|1|C|2544
6WRS|1|1|A|2545
6WRS|1|1|U|2546
6WRS|1|1|C|2547
*
6WRS|1|1|G|2572
6WRS|1|1|U|2573
6WRS|1|1|U|2574
6WRS|1|1|G|2575
*
6WRS|1|1|C|2587
6WRS|1|1|A|2588
6WRS|1|1|U|2589
6WRS|1|1|U|2590
6WRS|1|1|A|2591
6WRS|1|1|A|2592
6WRS|1|1|A|2593
6WRS|1|1|G|2594

Current chains

Chain 1
23S rRNA

Nearby chains

Chain W
50S ribosomal protein L14

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.097 s