3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGGAAG*CAG*CAAG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6ZTP_019 not in the Motif Atlas
Homologous match to J3_5J7L_041
Geometric discrepancy: 0.0655
The information below is about J3_5J7L_041
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32852.6
Basepair signature
cWW-tSH-F-F-F-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

6ZTP|1|BA|C|1298
6ZTP|1|BA|G|1299
6ZTP|1|BA|G|1300
6ZTP|1|BA|A|1301
6ZTP|1|BA|A|1302
6ZTP|1|BA|G|1303
*
6ZTP|1|BA|C|1625
6ZTP|1|BA|A|1626
6ZTP|1|BA|G|1627
*
6ZTP|1|BA|C|1639
6ZTP|1|BA|A|1640
6ZTP|1|BA|A|1641
6ZTP|1|BA|G|1642

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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