J3_6ZU1_019

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZU1_019 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.0655

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

6ZU1|1|BA|C|1298
6ZU1|1|BA|G|1299
6ZU1|1|BA|G|1300
6ZU1|1|BA|A|1301
6ZU1|1|BA|A|1302
6ZU1|1|BA|G|1303
*
6ZU1|1|BA|C|1625
6ZU1|1|BA|A|1626
6ZU1|1|BA|G|1627
*
6ZU1|1|BA|C|1639
6ZU1|1|BA|A|1640
6ZU1|1|BA|A|1641
6ZU1|1|BA|G|1642

Current chains

Chain BA

23S ribosomal RNA

Nearby chains