J3_6ZU1_020

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

6ZU1|1|BA|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZU1_020 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1203

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_71677.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

6ZU1|1|BA|C|1306
6ZU1|1|BA|A|1307
6ZU1|1|BA|A|1308
6ZU1|1|BA|G|1309
*
6ZU1|1|BA|C|1605
6ZU1|1|BA|C|1606
6ZU1|1|BA|C|1607
6ZU1|1|BA|A|1608
6ZU1|1|BA|A|1609
6ZU1|1|BA|A|1610
6ZU1|1|BA|C|1611
*
6ZU1|1|BA|G|1620
6ZU1|1|BA|U|1621
6ZU1|1|BA|G|1622

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34