J3_7ABZ_022
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ABZ_022 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.1693
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ABZ|1|2|C|1063
7ABZ|1|2|G|1064
7ABZ|1|2|U|1065
7ABZ|1|2|C|1066
7ABZ|1|2|A|1067
7ABZ|1|2|G|1068
*
7ABZ|1|2|C|1107
7ABZ|1|2|G|1108
7ABZ|1|2|C|1109
7ABZ|1|2|A|1110
7ABZ|1|2|A|1111
7ABZ|1|2|C|1112
7ABZ|1|2|C|1113
*
7ABZ|1|2|G|1187
7ABZ|1|2|A|1188
7ABZ|1|2|U|1189
7ABZ|1|2|G|1190
7ABZ|1|2|A|1191
7ABZ|1|2|C|1192
7ABZ|1|2|G|1193
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 5
- SsrA-binding protein
- Chain h
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S5
- Chain n
- 30S ribosomal protein S9
- Chain o
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S14
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