3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
GC*GUGAAAAG*CC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7ASO_006 not in the Motif Atlas
Homologous match to J3_7A0S_001
Geometric discrepancy: 0.159
The information below is about J3_7A0S_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_60031.2
Basepair signature
cWW-cWW-cWW-tWH-tSH-F-F
Number of instances in this motif group
7

Unit IDs

7ASO|1|Y|G|30
7ASO|1|Y|C|31
*
7ASO|1|Y|G|520
7ASO|1|Y|U|521
7ASO|1|Y|G|522
7ASO|1|Y|A|523
7ASO|1|Y|A|524
7ASO|1|Y|A|525
7ASO|1|Y|A|526
7ASO|1|Y|G|527
*
7ASO|1|Y|C|554
7ASO|1|Y|C|555

Current chains

Chain Y
23S

Nearby chains

Chain S
50S ribosomal protein L20
Chain Z
50S ribosomal protein L24

Coloring options:


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