J3_7ASO_006
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GC*GUGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASO_006 not in the Motif Atlas
- Homologous match to J3_7A0S_001
- Geometric discrepancy: 0.159
- The information below is about J3_7A0S_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_60031.2
- Basepair signature
- cWW-cWW-cWW-tWH-tSH-F-F
- Number of instances in this motif group
- 7
Unit IDs
7ASO|1|Y|G|30
7ASO|1|Y|C|31
*
7ASO|1|Y|G|520
7ASO|1|Y|U|521
7ASO|1|Y|G|522
7ASO|1|Y|A|523
7ASO|1|Y|A|524
7ASO|1|Y|A|525
7ASO|1|Y|A|526
7ASO|1|Y|G|527
*
7ASO|1|Y|C|554
7ASO|1|Y|C|555
Current chains
- Chain Y
- 23S
Nearby chains
- Chain S
- 50S ribosomal protein L20
- Chain Z
- 50S ribosomal protein L24
Coloring options: