J3_7AZO_005
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_005 not in the Motif Atlas
- Homologous match to J3_4LFB_002
- Geometric discrepancy: 0.1004
- The information below is about J3_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.1
- Basepair signature
- cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZO|1|16SA|C|1559
7AZO|1|16SA|A|1560
7AZO|1|16SA|A|1561
7AZO|1|16SA|G|1562
*
7AZO|1|16SA|C|1971
7AZO|1|16SA|U|1972
7AZO|1|16SA|A|1973
7AZO|1|16SA|G|1974
7AZO|1|16SA|U|1975
7AZO|1|16SA|A|1976
7AZO|1|16SA|A|1977
*
7AZO|1|16SA|U|2000
7AZO|1|16SA|G|2001
7AZO|1|16SA|A|2002
7AZO|1|16SA|A|2003
7AZO|1|16SA|U|2004
7AZO|1|16SA|A|2005
7AZO|1|16SA|C|2006
7AZO|1|16SA|G|2007
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ESIA
- Transfer RNA; tRNA
- Chain S7A
- 30S ribosomal protein S7
- Chain S9A
- 30S ribosomal protein S9
Coloring options: