J3_7AZO_006
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_006 not in the Motif Atlas
- Homologous match to J3_4LFB_003
- Geometric discrepancy: 0.0881
- The information below is about J3_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|16SA|U|1566
7AZO|1|16SA|G|1567
7AZO|1|16SA|G|1568
7AZO|1|16SA|A|1569
*
7AZO|1|16SA|U|1862
7AZO|1|16SA|A|1863
7AZO|1|16SA|C|1864
*
7AZO|1|16SA|G|1964
7AZO|1|16SA|G|1965
7AZO|1|16SA|A|1966
7AZO|1|16SA|A|1967
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ESIA
- Transfer RNA; tRNA
- Chain PSIA
- Transfer RNA; tRNA
- Chain S13A
- 30S ribosomal protein S13
- Chain S7A
- 30S ribosomal protein S7
- Chain S9A
- 30S ribosomal protein S9
- Chain THXA
- 30S ribosomal protein Thx
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