J3_7AZO_046
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAAG*CGCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 7AZO|1|23SB|A|1658
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_046 not in the Motif Atlas
- Homologous match to J3_8VTW_005
- Geometric discrepancy: 0.059
- The information below is about J3_8VTW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44702.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AZO|1|23SB|C|1355
7AZO|1|23SB|A|1356
7AZO|1|23SB|A|1357
7AZO|1|23SB|G|1358
*
7AZO|1|23SB|C|1654
7AZO|1|23SB|G|1655
7AZO|1|23SB|C|1656
7AZO|1|23SB|A|1657
7AZO|1|23SB|A|1658
7AZO|1|23SB|A|1659
7AZO|1|23SB|C|1660
*
7AZO|1|23SB|G|1669
7AZO|1|23SB|U|1670
7AZO|1|23SB|G|1671
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L34B
- 50S ribosomal protein L34
Coloring options: