J3_7AZO_048
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_048 not in the Motif Atlas
- Homologous match to J3_8VTW_006
- Geometric discrepancy: 0.0542
- The information below is about J3_8VTW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.4
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZO|1|23SB|U|2116
7AZO|1|23SB|U|2117
7AZO|1|23SB|G|2118
*
7AZO|1|23SB|C|2221
7AZO|1|23SB|U|2222
7AZO|1|23SB|A|2223
7AZO|1|23SB|A|2224
7AZO|1|23SB|C|2225
*
7AZO|1|23SB|G|2238
7AZO|1|23SB|G|2239
7AZO|1|23SB|A|2240
7AZO|1|23SB|C|2241
7AZO|1|23SB|A|2242
7AZO|1|23SB|G|2243
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L28B
- 50S ribosomal protein L28
- Chain L2B
- 50S ribosomal protein L2
- Chain L9B
- 50S ribosomal protein L9
- Chain S4A
- 30S ribosomal protein S4
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