J3_7AZO_049
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUC*GAG*UAGAAG
- Length
- 12 nucleotides
- Bulged bases
- 7AZO|1|23SB|G|2349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_049 not in the Motif Atlas
- Homologous match to J3_8VTW_007
- Geometric discrepancy: 0.0802
- The information below is about J3_8VTW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZO|1|23SB|C|2310
7AZO|1|23SB|U|2311
7AZO|1|23SB|C|2312
*
7AZO|1|23SB|G|2336
7AZO|1|23SB|A|2337
7AZO|1|23SB|G|2338
*
7AZO|1|23SB|U|2347
7AZO|1|23SB|A|2348
7AZO|1|23SB|G|2349
7AZO|1|23SB|A|2350
7AZO|1|23SB|A|2351
7AZO|1|23SB|G|2352
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain 5SB
- 5S ribosomal RNA; 5S rRNA
- Chain L18B
- 50S ribosomal protein L18
- Chain L27B
- 50S ribosomal protein L27
- Chain L5B
- 50S ribosomal protein L5
- Chain PSIB
- Transfer RNA; tRNA
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