J3_7AZO_050
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7AZO|1|23SB|A|2533, 7AZO|1|23SB|U|2534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_050 not in the Motif Atlas
- Homologous match to J3_8VTW_008
- Geometric discrepancy: 0.0668
- The information below is about J3_8VTW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.4
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|23SB|C|2532
7AZO|1|23SB|A|2533
7AZO|1|23SB|U|2534
7AZO|1|23SB|C|2535
*
7AZO|1|23SB|G|2560
7AZO|1|23SB|U|2561
7AZO|1|23SB|U|2562
*
7AZO|1|23SB|A|2576
7AZO|1|23SB|U|2577
7AZO|1|23SB|U|2578
7AZO|1|23SB|A|2579
7AZO|1|23SB|A|2580
7AZO|1|23SB|A|2581
7AZO|1|23SB|G|2582
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L13B
- 50S ribosomal protein L13
- Chain L14B
- 50S ribosomal protein L14
Coloring options: