J3_7AZO_061
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_061 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.0827
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7AZO|1|16SB|C|1215
7AZO|1|16SB|G|1216
7AZO|1|16SB|G|1217
*
7AZO|1|16SB|C|1280
7AZO|1|16SB|U|1281
7AZO|1|16SB|A|1282
7AZO|1|16SB|G|1283
7AZO|1|16SB|A|1284
*
7AZO|1|16SB|U|1380
7AZO|1|16SB|G|1381
7AZO|1|16SB|A|1382
7AZO|1|16SB|C|1383
7AZO|1|16SB|G|1384
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S12B
- 30S ribosomal protein S12
- Chain S15B
- 30S ribosomal protein S15
- Chain S17B
- 30S ribosomal protein S17
- Chain S8B
- 30S ribosomal protein S8
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