J3_7AZO_070
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAAG*CGCCAGAGAG*CGUAG
- Length
- 20 nucleotides
- Bulged bases
- 7AZO|1|23SB|G|346
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_070 not in the Motif Atlas
- Homologous match to J3_9DFE_006
- Geometric discrepancy: 0.0808
- The information below is about J3_9DFE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77124.1
- Basepair signature
- cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|23SB|C|322
7AZO|1|23SB|G|323
7AZO|1|23SB|A|324
7AZO|1|23SB|A|325
7AZO|1|23SB|G|326
*
7AZO|1|23SB|C|341
7AZO|1|23SB|G|342
7AZO|1|23SB|C|343
7AZO|1|23SB|C|344
7AZO|1|23SB|A|345
7AZO|1|23SB|G|346
7AZO|1|23SB|A|347
7AZO|1|23SB|G|348
7AZO|1|23SB|A|349
7AZO|1|23SB|G|350
*
7AZO|1|23SB|C|362
7AZO|1|23SB|G|363
7AZO|1|23SB|U|364
7AZO|1|23SB|A|365
7AZO|1|23SB|G|366
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L24B
- 50S ribosomal protein L24
- Chain L4B
- 50S ribosomal protein L4
Coloring options: