J3_7AZS_004
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 7AZS|1|16SA|U|1494
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_004 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.0715
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02285.1
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SA|C|1455
7AZS|1|16SA|U|1456
7AZS|1|16SA|A|1457
7AZS|1|16SA|G|1458
*
7AZS|1|16SA|C|1480
7AZS|1|16SA|G|1481
7AZS|1|16SA|A|1482
7AZS|1|16SA|A|1483
7AZS|1|16SA|G|1484
*
7AZS|1|16SA|C|1491
7AZS|1|16SA|G|1492
7AZS|1|16SA|U|1493
7AZS|1|16SA|U|1494
7AZS|1|16SA|A|1495
7AZS|1|16SA|A|1496
7AZS|1|16SA|G|1497
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain MRNA
- mRNA
- Chain S2A
- 30S ribosomal protein S2
- Chain S5A
- 30S ribosomal protein S5
- Chain S8A
- 30S ribosomal protein S8
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