J3_7AZS_056
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 7AZS|1|16SA|A|1282
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_056 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.1051
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.5
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SA|C|1215
7AZS|1|16SA|G|1216
7AZS|1|16SA|G|1217
*
7AZS|1|16SA|C|1280
7AZS|1|16SA|U|1281
7AZS|1|16SA|A|1282
7AZS|1|16SA|G|1283
7AZS|1|16SA|A|1284
*
7AZS|1|16SA|U|1380
7AZS|1|16SA|G|1381
7AZS|1|16SA|A|1382
7AZS|1|16SA|C|1383
7AZS|1|16SA|G|1384
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S12A
- 30S ribosomal protein S12
- Chain S15A
- 30S ribosomal protein S15
- Chain S17A
- 30S ribosomal protein S17
- Chain S8A
- 30S ribosomal protein S8
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