J3_7AZY_011

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CA*UAACU*AG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7AZY_011 not in the Motif Atlas

Homologous match to J3_8C3A_054

Geometric discrepancy: 0.1521

The information below is about J3_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_16991.1

Basepair signature

cWW-F-cWW-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7AZY|1|E|C|1631
7AZY|1|E|A|1632
*
7AZY|1|E|U|1641
7AZY|1|E|A|1642
7AZY|1|E|A|1643
7AZY|1|E|C|1644
7AZY|1|E|U|1645
*
7AZY|1|E|A|1810
7AZY|1|E|G|1811

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L34-A

Chain O

60S ribosomal protein L27-A