J3_7B5K_007
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 7B5K|1|A|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7B5K_007 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.1289
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_71677.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7B5K|1|A|C|1306
7B5K|1|A|A|1307
7B5K|1|A|A|1308
7B5K|1|A|G|1309
*
7B5K|1|A|C|1605
7B5K|1|A|C|1606
7B5K|1|A|C|1607
7B5K|1|A|A|1608
7B5K|1|A|A|1609
7B5K|1|A|A|1610
7B5K|1|A|C|1611
*
7B5K|1|A|G|1620
7B5K|1|A|U|1621
7B5K|1|A|G|1622
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: