J3_7BHP_010

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|A|2551
7BHP|1|L5|G|2552
7BHP|1|L5|A|2553
7BHP|1|L5|U|2554
7BHP|1|L5|G|2555
*
7BHP|1|L5|C|2572
7BHP|1|L5|A|2573
7BHP|1|L5|G|2574
7BHP|1|L5|U|2575
*
7BHP|1|L5|A|2757
7BHP|1|L5|G|2758
7BHP|1|L5|G|2759
7BHP|1|L5|G|2760
7BHP|1|L5|U|2761
7BHP|1|L5|G|2762
7BHP|1|L5|U|2763
7BHP|1|L5|A|2764
7BHP|1|L5|A|2765
7BHP|1|L5|A|2766
7BHP|1|L5|U|2767

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LZ

60S ribosomal protein L27