J3_7BL4_007
3D structure
- PDB id
- 7BL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 7BL4|1|A|C|1607, 7BL4|1|A|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7BL4_007 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.1875
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_71677.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7BL4|1|A|C|1306
7BL4|1|A|A|1307
7BL4|1|A|A|1308
7BL4|1|A|G|1309
*
7BL4|1|A|C|1605
7BL4|1|A|C|1606
7BL4|1|A|C|1607
7BL4|1|A|A|1608
7BL4|1|A|A|1609
7BL4|1|A|A|1610
7BL4|1|A|C|1611
*
7BL4|1|A|G|1620
7BL4|1|A|U|1621
7BL4|1|A|G|1622
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
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