J3_7F5S_025
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- UAUC*GU(PSU)*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 7F5S|1|L5|A|4464, 7F5S|1|L5|U|4465
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7F5S_025 not in the Motif Atlas
- Homologous match to J3_8C3A_011
- Geometric discrepancy: 0.1547
- The information below is about J3_8C3A_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_98597.1
- Basepair signature
- cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7F5S|1|L5|U|4463
7F5S|1|L5|A|4464
7F5S|1|L5|U|4465
7F5S|1|L5|C|4466
*
7F5S|1|L5|G|4491
7F5S|1|L5|U|4492
7F5S|1|L5|PSU|4493
*
7F5S|1|L5|A|4507
7F5S|1|L5|C|4508
7F5S|1|L5|U|4509
7F5S|1|L5|A|4510
7F5S|1|L5|A|4511
7F5S|1|L5|U|4512
7F5S|1|L5|A|4513
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LO
- 60S ribosomal protein L13a
- Chain LV
- 60S ribosomal protein L23
Coloring options: