3D structure

PDB id
7JQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUUGACAU*ACAG*CUUACG
Length
18 nucleotides
Bulged bases
7JQL|1|2a|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7JQL_073 not in the Motif Atlas
Homologous match to J3_4LFB_016
Geometric discrepancy: 0.1791
The information below is about J3_4LFB_016
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_76475.2
Basepair signature
cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
Number of instances in this motif group
2

Unit IDs

7JQL|1|2a|C|990
7JQL|1|2a|U|991
7JQL|1|2a|U|992
7JQL|1|2a|G|993
7JQL|1|2a|A|994
7JQL|1|2a|C|995
7JQL|1|2a|A|996
7JQL|1|2a|U|997
*
7JQL|1|2a|A|1044
7JQL|1|2a|C|1045
7JQL|1|2a|A|1046
7JQL|1|2a|G|1047
*
7JQL|1|2a|C|1210
7JQL|1|2a|U|1211
7JQL|1|2a|U|1212
7JQL|1|2a|A|1213
7JQL|1|2a|C|1214
7JQL|1|2a|G|1215

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

Chain 2n
30S ribosomal protein S14 type Z

Coloring options:


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