J3_7LV0_006

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7LV0_006 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.1142

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7LV0|1|1|C|1298
7LV0|1|1|G|1299
7LV0|1|1|G|1300
7LV0|1|1|A|1301
7LV0|1|1|A|1302
7LV0|1|1|G|1303
*
7LV0|1|1|C|1625
7LV0|1|1|A|1626
7LV0|1|1|G|1627
*
7LV0|1|1|C|1639
7LV0|1|1|A|1640
7LV0|1|1|A|1641
7LV0|1|1|G|1642

Current chains

Chain 1

23S ribosomal RNA

Nearby chains